TY - JOUR
T1 - DNA induces folding in α-synuclein
T2 - Understanding the mechanism using chaperone property of osmolytes
AU - Hegde, Muralidhar L.
AU - Rao, K. S.J.
N1 - Funding Information:
The authors thank Director, CFTRI for his encouragement. The financial assistance by Department of Atomic Energy, India through BNRS project is gratefully acknowledged. M.L.H. is grateful to Council for Scientific and Industrial Research, India for Senior Research Fellowships. We thank Prof. R. Varadarajan, Molecular Biophysics Unit, Indian Institute of Science, Bangalore for reviewing the manuscript and providing valuable suggestions. We also thank Chairman, Molecular Biophysics Unit, Indian Institute of Science, India for allowing us to use the Circular Dichroism facility. We thank Prof. H.S. Prakash, Department of Applied Botany and Biotechnology, University of Mysore, India for providing TEM facility.
Copyright:
Copyright 2009 Elsevier B.V., All rights reserved.
PY - 2007/8/1
Y1 - 2007/8/1
N2 - α-Synuclein conformational modulation leading to fibrillation has been centrally implicated in Parkinson's disease. Previously, we have shown that α-synuclein has DNA binding property. In the present study, we have characterized the effect of DNA binding on the conformation and fibrillation kinetics of α-synuclein. It was observed that single-stranded circular DNA induce α-helix conformation in α-synuclein while plasmid supercoiled DNA has dual effect inducing a partially folded conformation and α-helix under different experimental conditions. Interestingly, α-synuclein showed a specificity for GC* nucleotide sequence in its binding ability to DNA. The aggregation kinetics data showed that DNA which induced partially folded conformation in α-synuclein promoted the fibrillation while DNA which induced α-helix delayed the fibrillation, indicating that the partially folded intermediate conformation is critical in the aggregation process. Further, the mechanism of DNA-induced folding/aggregation of α-synuclein was studied using effect of osmolytes on α-synuclein as a model system. Among the five osmolytes used, Glycerol, trimethylamine-N-oxide, Betaine, and Taurine induced partially folded conformation and in turn enhanced the aggregation of α-synuclein. The ability of DNA and osmolytes in inducing conformational transition in α-synuclein, indicates that two factors are critical in modulating α-synuclein folding: (i) electrostatic interaction as in the case of DNA, and (ii) hydrophobic interactions as in the case of osmolytes. The property of DNA inducing α-helical conformation in α-synuclein and inhibiting the fibrillation may be of significance in engineering DNA-chip based therapeutic approaches to PD and other amyloid disorders.
AB - α-Synuclein conformational modulation leading to fibrillation has been centrally implicated in Parkinson's disease. Previously, we have shown that α-synuclein has DNA binding property. In the present study, we have characterized the effect of DNA binding on the conformation and fibrillation kinetics of α-synuclein. It was observed that single-stranded circular DNA induce α-helix conformation in α-synuclein while plasmid supercoiled DNA has dual effect inducing a partially folded conformation and α-helix under different experimental conditions. Interestingly, α-synuclein showed a specificity for GC* nucleotide sequence in its binding ability to DNA. The aggregation kinetics data showed that DNA which induced partially folded conformation in α-synuclein promoted the fibrillation while DNA which induced α-helix delayed the fibrillation, indicating that the partially folded intermediate conformation is critical in the aggregation process. Further, the mechanism of DNA-induced folding/aggregation of α-synuclein was studied using effect of osmolytes on α-synuclein as a model system. Among the five osmolytes used, Glycerol, trimethylamine-N-oxide, Betaine, and Taurine induced partially folded conformation and in turn enhanced the aggregation of α-synuclein. The ability of DNA and osmolytes in inducing conformational transition in α-synuclein, indicates that two factors are critical in modulating α-synuclein folding: (i) electrostatic interaction as in the case of DNA, and (ii) hydrophobic interactions as in the case of osmolytes. The property of DNA inducing α-helical conformation in α-synuclein and inhibiting the fibrillation may be of significance in engineering DNA-chip based therapeutic approaches to PD and other amyloid disorders.
KW - α-Synuclein
KW - α-Synuclein aggregation
KW - Neurodegeneration
KW - Omolytes
KW - Parkinson's disease
KW - Protein folding
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U2 - 10.1016/j.abb.2007.03.042
DO - 10.1016/j.abb.2007.03.042
M3 - Article
C2 - 17537399
AN - SCOPUS:34447618598
SN - 0003-9861
VL - 464
SP - 57
EP - 69
JO - Archives of Biochemistry and Biophysics
JF - Archives of Biochemistry and Biophysics
IS - 1
ER -